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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129227489_129367668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

129227489 - 129367668

Intron Length:

140180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CGTGTGTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TCTCGCCTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.4

39.1

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

0.56

64.9

45.6

Minor 5ss

42.2

-0.9

3.1

55.7

48.5

Minor BPS

48.9

-0.1

2.1

64.29

41.6

Associated Gene:

Gene:

MID1

Ensembl Gene ID:

ENSAPLG00000007693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032156

129227117 - 129461210

234094