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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129368385_129418661_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129368385 - 129418661

Intron Length:

50277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTGACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTCTTTTTGACA

Flanking Amino Acid:

ALSERYDKLKQNLESNLTNL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

29.9

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.79

0.9

83.2

Minor 5ss

30.7

-2.2

3.1

40.9

45.4

Minor BPS

72.3

0.7

1.1

77.18

33.8

Associated Gene:

Gene:

MID1

Ensembl Gene ID:

ENSAPLG00000007693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008017

129367669 - 129461227

93559

ENSAPLT00000032156

129227117 - 129461210

234094