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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129418758_129433645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129418758 - 129433645

Intron Length:

14888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

AAAAATTTAACA

Flanking Amino Acid:

KLIQTCQHVEVNASRQETKL

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

75.5

0.57

0.9

69.3

36.9

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

56.1

0.19

1.5

62.13

37.1

Associated Gene:

Gene:

MID1

Ensembl Gene ID:

ENSAPLG00000007693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032156

129227117 - 129461210

234094

ENSAPLT00000008017

129367669 - 129461227

93559