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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129459298_129460861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129459298 - 129460861

Intron Length:

1564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CTTTCCTGAGTA

Flanking Amino Acid:

YWEVAISGSTWYAIGISYKS

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

60.6

0.33

1.7

72.2

40.2

Associated Gene:

Gene:

MID1

Ensembl Gene ID:

ENSAPLG00000007693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032156

129227117 - 129461210

234094

ENSAPLT00000008017

129367669 - 129461227

93559