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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129560631_129566106_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129560631 - 129566106

Intron Length:

5476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTGCCTTGATC

Flanking Amino Acid:

AQRRELILAIKNARQRQDGV

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

88.2

0.86

0.8

28.6

Minor 5ss

31.4

-2.1

2.7

33.6

35.4

Minor BPS

69.4

0.59

1.4

73.12

38.9

Associated Gene:

Gene:

CLCN4

Ensembl Gene ID:

ENSAPLG00000007108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022882

129557797 - 129587656

29860

ENSAPLT00000007398

129558797 - 129600698

41902

ENSAPLT00000027388

129550968 - 129587490

36523