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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129566506_129569004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129566506 - 129569004

Intron Length:

2499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACAGTAC

5'SS Class:

major

3'SS Sequence:

TCCTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

GGGAATGTGACT

Flanking Amino Acid:

YAMVGAAACLGGVTRMTVSL

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.1

54.4

39.7

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

74.9

0.56

71.9

Minor 5ss

34.9

-1.7

3.5

40.2

46.2

Minor BPS

41.1

-0.6

2.1

54.01

41.5

Associated Gene:

Gene:

CLCN4

Ensembl Gene ID:

ENSAPLG00000007108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007398

129558797 - 129600698

41902

ENSAPLT00000027388

129550968 - 129587490

36523

ENSAPLT00000022882

129557797 - 129587656

29860