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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129572231_129572790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129572231 - 129572790

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GAAGTGTTGACT

Flanking Amino Acid:

IGGVLFSLEEVSYYFPLKTL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

71.9

0.49

69.1

41.8

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

45.9

-0.2

2.1

60.68

Associated Gene:

Gene:

CLCN4

Ensembl Gene ID:

ENSAPLG00000007108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027388

129550968 - 129587490

36523

ENSAPLT00000022882

129557797 - 129587656

29860

ENSAPLT00000007398

129558797 - 129600698

41902