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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129572872_129572963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129572872 - 129572963

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTGTACATAAAT

Flanking Amino Acid:

YSKNEGKRREVLSAAAAAGV

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

79.7

0.67

0.8

74.2

35.9

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

57.2

0.3

1.9

79.71

41.5

Associated Gene:

Gene:

CLCN4

Ensembl Gene ID:

ENSAPLG00000007108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027388

129550968 - 129587490

36523

ENSAPLT00000022882

129557797 - 129587656

29860

ENSAPLT00000007398

129558797 - 129600698

41902