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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129573171_129575063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129573171 - 129575063

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AGCTCTTCAACA

Flanking Amino Acid:

PYACGSGIPEIKTILSGFII

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

81.1

0.7

0.8

72.3

37.8

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

61.4

0.35

1.5

66.75

39.7

Associated Gene:

Gene:

CLCN4

Ensembl Gene ID:

ENSAPLG00000007108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027388

129550968 - 129587490

36523

ENSAPLT00000022882

129557797 - 129587656

29860

ENSAPLT00000007398

129558797 - 129600698

41902