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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129587491_129600694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129587491 - 129600694

Intron Length:

13204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

CGCCTACTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTTATTGAAAT

Flanking Amino Acid:

MDTNMVNAGEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.3

44.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

72.8

0.51

0.9

65.4

35.1

Minor 5ss

45.2

-0.5

2.5

49.2

47.1

Minor BPS

57.1

0.3

1.7

77.98

37.6

Associated Gene:

Gene:

CLCN4

Ensembl Gene ID:

ENSAPLG00000007108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007398

129558797 - 129600698

41902