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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129606052_129607068_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
129606052 - 129607068

Intron Length:
1017

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAGCTA

5'SS Class:
major

3'SS Sequence:
CCAATTAATTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAT

U12 Branch Point Sequence:
TTTATTTGAATC

Flanking Amino Acid:
LERRTLRYKQQSCRSSLAEL

Intron Amino Acid Position:
952

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1
64.7
40.9

Major BPS
87.7
0.94
0.8
77.7
36.7

Major PPT
66.2
0.37
1
62.8
41.9

Minor 5ss
39.8
-1.1
3.4
55.6
48.6

Minor BPS
61.2
0.33
1.4
71.31
33.9

Associated Gene:

Gene:
WWC3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

129603083 - 129700692
97610

129602573 - 129700692
98120