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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129607162_129608170_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
129607162 - 129608170

Intron Length:
1009

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTGAGTAAG

5'SS Class:
major

3'SS Sequence:
CTTTTCTACTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TTATTTTCAATA

Flanking Amino Acid:
PGARSQYVCRLYRSDSDSST

Intron Amino Acid Position:
921

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1
67.7
39.3

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
81.8
0.72
0.8
81.1
29.7

Minor 5ss
30.9
-2.2
2.6
29.9
36.5

Minor BPS
63
0.4
1.4
71.76
34.5

Associated Gene:

Gene:
WWC3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

129603083 - 129700692
97610

129602573 - 129700692
98120