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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129610229_129610966_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
129610229 - 129610966

Intron Length:
738

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATGGATC

5'SS Class:
major

3'SS Sequence:
TGTTACCTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCAAAT

U12 Branch Point Sequence:
TTTGTCTGAAGT

Flanking Amino Acid:
SSGNVTTVKTDAVTALLART

Intron Amino Acid Position:
762

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1
69.9
40.5

Major BPS
77.3
0.68
1
81.5
27

Major PPT
75.9
0.58
0.9
66.9
40.2

Minor 5ss
43.4
-0.7
3.1
60.9
43.9

Minor BPS
58.5
0.35
1.9
80.07
42.1

Associated Gene:

Gene:
WWC3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

129603083 - 129700692
97610

129602573 - 129700692
98120