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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129618293_129619014_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
129618293 - 129619014

Intron Length:
722

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGGTGT

5'SS Class:
major

3'SS Sequence:
TCTGTTTGTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCATCAT

U12 Branch Point Sequence:
TTTACAGTACTT

Flanking Amino Acid:
DSGVFEALSKRNEDMEEPVY

Intron Amino Acid Position:
587

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.3
70.4
42.5

Major BPS
75.6
0.64
1.1
76.2
37.5

Major PPT
80.5
0.69
0.9
76.3
37.7

Minor 5ss
33.9
-1.8
3.3
47.8
47.7

Minor BPS
45.6
-0.2
2.4
73.63
43.4

Associated Gene:

Gene:
WWC3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

129603083 - 129700692
97610

129602573 - 129700692
98120