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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129626833_129630091_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
129626833 - 129630091

Intron Length:
3259

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGGCAA

5'SS Class:
major

3'SS Sequence:
TGTTTAATTATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAT

U12 Branch Point Sequence:
ATCTGTTTAATT

Flanking Amino Acid:
RATSAHGATERILLQEKRNC

Intron Amino Acid Position:
325

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.4
0.43
1.2
59.6
40.6

Major BPS
86.7
0.91
0.7
84.2
21.8

Major PPT
76.8
0.6
0.9
70.8
38.9

Minor 5ss
32.5
-2
3.1
38.7
46.5

Minor BPS
63.5
0.5
1.7
77.48
40

Associated Gene:

Gene:
WWC3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

129603083 - 129700692
97610

129602573 - 129700692
98120