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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129760739_129765461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129760739 - 129765461

Intron Length:

4723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCCATTATTT

Flanking Amino Acid:

ELDHDLSEKKQELIDSISRK

Intron Amino Acid Position:

1580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

84.5

0.78

0.8

80.4

31.5

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

54.4

0.22

1.9

74.56

42.4

Associated Gene:

Gene:

SHROOM2

Ensembl Gene ID:

ENSAPLG00000029599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027510

129754052 - 129878259

124208

ENSAPLT00000026770

129752855 - 129878259

125405

ENSAPLT00000040267

129754052 - 129859968

105917