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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129790267_129792189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129790267 - 129792189

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGGT

5'SS Class:

strong_major

3'SS Sequence:

AAACCACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

GTGCTCTAAACC

Flanking Amino Acid:

SSPSTDFYKQEVSVEVRRQA

Intron Amino Acid Position:

1048

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

40.8

Major BPS

0.57

73.6

28.6

Major PPT

61.5

0.26

0.9

56.4

Minor 5ss

31.1

-2.2

3.6

47.6

47.8

Minor BPS

55.5

0.15

1.7

64.03

41.5

Associated Gene:

Gene:

SHROOM2

Ensembl Gene ID:

ENSAPLG00000029599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040267

129754052 - 129859968

105917

ENSAPLT00000027510

129754052 - 129878259

124208

ENSAPLT00000026770

129752855 - 129878259

125405