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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129894060_129896922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129894060 - 129896922

Intron Length:

2863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TTTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

GCAGCTGTGACA

Flanking Amino Acid:

WPSAFCVGSAMWIQLLYSAG

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

70.1

40.6

Major BPS

0.62

65.3

41.5

Major PPT

90.6

0.91

0.6

85.8

21.3

Minor 5ss

36.1

-1.6

47.1

41.5

Minor BPS

44.5

-0.4

2.1

50.89

41.1

Associated Gene:

Gene:

GPR143

Ensembl Gene ID:

ENSAPLG00000005661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005862

129892132 - 129914668

22537

ENSAPLT00000034520

129892132 - 129906253

14122