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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129898428_129898705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129898428 - 129898705

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GATTTCTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TAATGAATAACC

Flanking Amino Acid:

VALLYYPSLSSCEKGLEHAI

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

84.4

0.85

34.5

Major PPT

79.9

0.67

0.9

77.2

36.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

46.7

-0.2

2.2

63.16

41.4

Associated Gene:

Gene:

GPR143

Ensembl Gene ID:

ENSAPLG00000005661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034520

129892132 - 129906253

14122

ENSAPLT00000005862

129892132 - 129914668

22537