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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129904161_129905582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129904161 - 129905582

Intron Length:

1422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTCAT

5'SS Class:

major

3'SS Sequence:

GGCTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ACCTCCTGCATG

Flanking Amino Acid:

SATLITWIIMGILNPMQGFL

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

70.6

41.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

63.4

0.3

0.9

41.5

Minor 5ss

34.6

-1.7

3.3

43.6

Minor BPS

46.7

-0.4

44.5

Associated Gene:

Gene:

GPR143

Ensembl Gene ID:

ENSAPLG00000005661

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005862

129892132 - 129914668

22537

ENSAPLT00000034520

129892132 - 129906253

14122