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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129923458_129924642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129923458 - 129924642

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGGTTCTTAATC

Flanking Amino Acid:

KVGASASDGSVCVLDLRK*

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

70.2

40.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.6

0.78

0.7

77.8

31.1

Minor 5ss

34.3

-1.8

44.9

42.8

Minor BPS

74.3

0.74

1.2

74.45

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018015

129923431 - 130049257

125827

ENSAPLT00000005427

129923057 - 130063668

140612