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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129924745_129925797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129924745 - 129925797

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

TTTTGCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

CCATGCTGAATG

Flanking Amino Acid:

DKCVHIWNTQSGTLVHSYRG

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

85.7

0.8

0.7

81.4

30.6

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

46.8

-0.3

48.5

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018015

129923431 - 130049257

125827

ENSAPLT00000005427

129923057 - 130063668

140612