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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129927225_129929724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129927225 - 129929724

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAA

5'SS Class:

strong_major

3'SS Sequence:

TACCCTGACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

ATTACCCTGACT

Flanking Amino Acid:

ASCSDDMTLKIWSMKQDTCV

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

75.8

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

60.1

0.23

0.9

58.2

37.1

Minor 5ss

37.3

-1.4

47.4

47.9

Minor BPS

64.9

0.55

1.7

83.7

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018015

129923431 - 130049257

125827

ENSAPLT00000005427

129923057 - 130063668

140612