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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129929800_129931270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129929800 - 129931270

Intron Length:

1471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

CTCTTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATTCACTTAATA

Flanking Amino Acid:

RPVKTFQGHTNEVNAIKWDP

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

78.2

32.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

86.5

0.82

0.7

84.8

28.4

Minor 5ss

-0.4

2.8

63.8

41.6

Minor BPS

69.4

0.6

1.4

76.71

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018015

129923431 - 130049257

125827

ENSAPLT00000005427

129923057 - 130063668

140612