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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129931393_129934746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129931393 - 129934746

Intron Length:

3354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTACTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

TGTTCCCTAATG

Flanking Amino Acid:

EAKQQFPFHSAPALDVDWQN

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

77.3

37.6

Major BPS

69.6

0.49

1.1

69.5

Major PPT

78.4

0.64

0.9

72.5

37.4

Minor 5ss

36.9

-1.5

2.9

51.8

44.6

Minor BPS

67.5

0.41

1.7

73.17

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018015

129923431 - 130049257

125827

ENSAPLT00000005427

129923057 - 130063668

140612