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Intron Name: Anas_platyrhynchos_platyrhynchos_1_129954365_129957110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129954365 - 129957110

Intron Length:

2746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TGCAATTTGACT

Flanking Amino Acid:

YVEAEISINEDGTVFDGRPI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

79.7

0.67

0.8

74.1

31.1

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

0.21

1.6

69.54

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037037

129944516 - 130063668

119153

ENSAPLT00000018015

129923431 - 130049257

125827

ENSAPLT00000005427

129923057 - 130063668

140612