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Intron Name: Anas_platyrhynchos_platyrhynchos_1_130014168_130048851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

130014168 - 130048851

Intron Length:

34684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGCA

5'SS Class:

major

3'SS Sequence:

TCTCTTATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCTCTCTTATTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

40.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

85.9

0.81

0.8

29.3

Minor 5ss

37.1

-1.5

3.4

50.2

46.2

Minor BPS

0.02

1.7

59.89

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018015

129923431 - 130049257

125827