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Intron Name: Anas_platyrhynchos_platyrhynchos_1_130125224_130202782_F

Intron Information:

Intron Rank:

129118

Intron Class:

major

Intron Phase:

Intron Coordinates:

130125224 - 130202782

Intron Length:

77559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAG

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

63.7

0.34

1.5

63.4

Major PPT

85.8

0.81

0.8

84.1

30.9

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024041

130124982 - 130203412

78431