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Intron Name: Anas_platyrhynchos_platyrhynchos_1_130620250_130621042_F

Intron Information:

Intron Rank:

143873

Intron Class:

major

Intron Phase:

Intron Coordinates:

130620250 - 130621042

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATCTGATGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.2

79.3

31.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-2.2

2.6

32.5

35.1

Minor BPS

47.2

-0.2

64.49

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017214

130619111 - 130621179

2069