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Intron Name: Anas_platyrhynchos_platyrhynchos_1_130902363_130904940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130902363 - 130904940

Intron Length:

2578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

TGCATATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATGTTTTAATA

Flanking Amino Acid:

QQQGYSTGLIGKWHQGVNCE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.2

0.61

0.9

73.5

40.8

Minor 5ss

-2.2

3.2

45.7

Minor BPS

66.6

0.52

1.3

71.36

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008180

130896957 - 130911489

14533