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Intron Name: Anas_platyrhynchos_platyrhynchos_1_130906606_130907587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130906606 - 130907587

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGCATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TAATACCTGACA

Flanking Amino Acid:

DVGCYGNDTIRTPNIDRLAK

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

0.54

0.9

70.5

40.2

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

51.8

0.05

1.9

66.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008180

130896957 - 130911489

14533