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Intron Name: Anas_platyrhynchos_platyrhynchos_1_130908349_130910812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130908349 - 130910812

Intron Length:

2464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CTTGGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGACAA

U12 Branch Point Sequence:

TTGGTTTTACAG

Flanking Amino Acid:

LFPQAKNCCFDLSTPNAKMI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

75.4

33.7

Major BPS

49.8

-0

1.1

58.8

38.1

Major PPT

82.2

0.73

0.9

75.6

38.3

Minor 5ss

38.6

-1.3

2.7

49.8

40.3

Minor BPS

46.1

-0.4

1.8

51.07

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008180

130896957 - 130911489

14533