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Intron Name: Anas_platyrhynchos_platyrhynchos_1_131216595_131220865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

131216595 - 131220865

Intron Length:

4271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTACTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TTTTGTTTAACA

Flanking Amino Acid:

DFPRHLDLYVKDLIKKLLVV

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

86.1

0.81

0.7

81.1

29.5

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

76.2

0.82

1.7

86.93

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007925

131209936 - 131263923

53988