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Intron Name: Anas_platyrhynchos_platyrhynchos_1_131220962_131226926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

131220962 - 131226926

Intron Length:

5965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTAAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTTTTTCTAACT

Flanking Amino Acid:

LGILIFEMLSGFPPFFDDNP

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

60.6

0.24

1.1

56.6

42.5

Minor 5ss

-1.8

3.3

40.9

45.4

Minor BPS

66.3

0.59

1.7

83.74

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007925

131209936 - 131263923

53988