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Intron Name: Anas_platyrhynchos_platyrhynchos_1_131443839_131451191_F

Intron Information:

Intron Rank:

142537

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

131443839 - 131451191

Intron Length:

7353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

CTCCCCTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

66.7

0.42

58.1

38.5

Major PPT

47.9

-0.1

1.1

45.1

33.2

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

54.8

0.15

1.6

63.18

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023265

131443832 - 131451975

8144