Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_131817266_131819759_R

Intron Information:

Intron Rank:

141169

Intron Class:

major

Intron Phase:

Intron Coordinates:

131817266 - 131819759

Intron Length:

2494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAGGTTCA

5'SS Class:

major

3'SS Sequence:

CATTTTTACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCATTTTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

62.3

39.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.52

0.9

69.2

35.7

Minor 5ss

40.4

-1.1

46.1

43.3

Minor BPS

52.7

0.16

1.7

68.96

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033674

131816879 - 131820622

3744