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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13273568_13283174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13273568 - 13283174

Intron Length:

9607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TCCCTCTGAAAT

Flanking Amino Acid:

PADIWSTACMAFELATGDYL

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

69.8

0.49

37.5

Major PPT

74.9

0.56

68.8

42.1

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

52.3

0.15

1.6

67.14

43.3

Associated Gene:

Gene:

SRPK2

Ensembl Gene ID:

ENSAPLG00000004027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020028

13268767 - 13419886

151120

ENSAPLT00000047865

13268767 - 13408616

139850

ENSAPLT00000019894

13268767 - 13408616

139850

ENSAPLT00000038440

13268767 - 13408616

139850

ENSAPLT00000004167

13268767 - 13408616

139850

ENSAPLT00000026997

13268767 - 13408616

139850

ENSAPLT00000023097

13268767 - 13408616

139850