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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13288778_13289384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13288778 - 13289384

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTGTC

5'SS Class:

major

3'SS Sequence:

TAAAATTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GCTCACTAAAAT

Flanking Amino Acid:

VVDEEPGNDDGEAEDQDEKE

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

73.5

35.6

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

74.1

0.54

44.9

Minor 5ss

33.7

-1.9

3.1

42.4

38.7

Minor BPS

47.4

-0.1

1.9

64.73

44.9

Associated Gene:

Gene:

SRPK2

Ensembl Gene ID:

ENSAPLG00000004027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020028

13268767 - 13419886

151120

ENSAPLT00000047865

13268767 - 13408616

139850

ENSAPLT00000019894

13268767 - 13408616

139850

ENSAPLT00000038440

13268767 - 13408616

139850

ENSAPLT00000004167

13268767 - 13408616

139850

ENSAPLT00000026997

13268767 - 13408616

139850

ENSAPLT00000023097

13268767 - 13408616

139850