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Intron Name: Anas_platyrhynchos_platyrhynchos_1_132959360_132986438_F

Intron Information:

Intron Rank:

144888

Intron Class:

major

Intron Phase:

Intron Coordinates:

132959360 - 132986438

Intron Length:

27079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTATGTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.1

0.81

0.8

80.9

31.1

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

46.6

-0.1

2.4

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028213

132958794 - 132996416

37623