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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13304348_13304845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13304348 - 13304845

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTATTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

FSTVWLCWDMQGKRFVAMKV

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.5

0.69

79.5

37.9

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

SRPK2

Ensembl Gene ID:

ENSAPLG00000004027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023097

13268767 - 13408616

139850

ENSAPLT00000020028

13268767 - 13419886

151120

ENSAPLT00000047865

13268767 - 13408616

139850

ENSAPLT00000019894

13268767 - 13408616

139850

ENSAPLT00000038440

13268767 - 13408616

139850

ENSAPLT00000004167

13268767 - 13408616

139850

ENSAPLT00000026997

13268767 - 13408616

139850