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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13304955_13311427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13304955 - 13311427

Intron Length:

6473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAAAG

Flanking Amino Acid:

EQEDPADYCKGGYHPVKIGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

39.9

Major BPS

100

1.24

0.5

100

Major PPT

72.8

0.51

1.1

72.7

Minor 5ss

26.5

-2.7

3.1

32.3

42.4

Minor BPS

70.4

0.5

1.8

78.39

37.7

Associated Gene:

Gene:

SRPK2

Ensembl Gene ID:

ENSAPLG00000004027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023097

13268767 - 13408616

139850

ENSAPLT00000020028

13268767 - 13419886

151120

ENSAPLT00000047865

13268767 - 13408616

139850

ENSAPLT00000019894

13268767 - 13408616

139850

ENSAPLT00000038440

13268767 - 13408616

139850

ENSAPLT00000004167

13268767 - 13408616

139850

ENSAPLT00000026997

13268767 - 13408616

139850