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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133063971_133066440_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

133063971 - 133066440

Intron Length:

2470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGACTTT

5'SS Class:

major

3'SS Sequence:

GCAATGAGAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTTTCTTTATTT

Flanking Amino Acid:

MFSVKPLQRLALRRQTIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

68.2

39.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

47.2

-0.1

1.1

36.3

Minor 5ss

42.3

-0.9

3.5

63.6

48.1

Minor BPS

69.3

0.68

1.6

83.14

Associated Gene:

Gene:

TRPC6

Ensembl Gene ID:

ENSAPLG00000004017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004144

133063172 - 133066466

3295