Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_133270987_133275483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133270987 - 133275483

Intron Length:

4497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

GAATACTTAATA

Flanking Amino Acid:

HPEGSNYPFEVLCDMDFQGG

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

67.3

0.39

1.1

67.5

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

64.7

0.46

1.5

67.81

37.9

Associated Gene:

Gene:

ANGPTL5

Ensembl Gene ID:

ENSAPLG00000004584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004709

133267761 - 133280599

12839