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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133314885_133317576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133314885 - 133317576

Intron Length:

2692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TACACTTTGATT

Flanking Amino Acid:

SLDRLNQRLQNVQEAITRNP

Intron Amino Acid Position:

888

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

79.8

0.67

0.8

77.6

36.1

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

62.4

0.47

1.3

72.14

39.3

Associated Gene:

Gene:

CEP126

Ensembl Gene ID:

ENSAPLG00000004690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004827

133284162 - 133319642

35481

ENSAPLT00000004817

133292148 - 133319642

27495