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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133357007_133363131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133357007 - 133363131

Intron Length:

6125

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGGTTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

TAAATATTAAGT

Flanking Amino Acid:

TTKALYKDLVSVRKNHETKE

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.7

1.17

0.7

98.4

4.81

Major BPS

66.7

0.42

58.1

38.5

Major PPT

75.6

0.58

0.9

71.6

38.2

Minor 5ss

28.3

-2.5

4.2

48.7

47.5

Minor BPS

49.1

0.02

1.9

67.91

42.2

Associated Gene:

Gene:

CFAP300

Ensembl Gene ID:

ENSAPLG00000004970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005139

133346273 - 133365927

19655