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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133363220_133365858_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

133363220 - 133365858

Intron Length:

2639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTACAGAAT

5'SS Class:

weak_major

3'SS Sequence:

AAATAAATTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTACTAACT

Flanking Amino Acid:

SAYVSINNFIDPFNLIRFIF

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.1

58.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

51.7

0.04

1.2

51.7

45.1

Minor 5ss

34.1

-1.8

3.6

48.8

Minor BPS

0.36

1.9

81.5

39.9

Associated Gene:

Gene:

CFAP300

Ensembl Gene ID:

ENSAPLG00000004970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005139

133346273 - 133365927

19655