Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_133515535_133517794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133515535 - 133517794

Intron Length:

2260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTGTCCTTGAAG

Flanking Amino Acid:

LNETSHSTEQENNGNSSRLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.8

38.2

Major BPS

58.9

0.22

49.8

35.1

Major PPT

75.5

0.57

76.1

32.9

Minor 5ss

36.6

-1.5

3.2

51.3

45.2

Minor BPS

69.7

0.48

1.5

71.8

41.2

Associated Gene:

Gene:

TMEM123

Ensembl Gene ID:

ENSAPLG00000005784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005979

133507516 - 133522787

15272