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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133517873_133522729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133517873 - 133522729

Intron Length:

4857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

VLLLLVAPGSFEDTDGGTNT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.6

40.2

Major BPS

68.7

0.47

0.9

67.9

Major PPT

75.6

0.58

1.1

79.2

38.4

Minor 5ss

33.5

-1.9

2.8

46.7

41.7

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

TMEM123

Ensembl Gene ID:

ENSAPLG00000005784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005979

133507516 - 133522787

15272