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Intron Name: Anas_platyrhynchos_platyrhynchos_1_13358307_13408243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13358307 - 13408243

Intron Length:

49937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTTCTGATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.2

36.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.7

0.9

72.7

42.2

Minor 5ss

32.3

-2

2.6

35.2

34.2

Minor BPS

59.5

0.38

1.7

78.82

37.6

Associated Gene:

Gene:

SRPK2

Ensembl Gene ID:

ENSAPLG00000004027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004167

13268767 - 13408616

139850

ENSAPLT00000038440

13268767 - 13408616

139850

ENSAPLT00000026997

13268767 - 13408616

139850

ENSAPLT00000023097

13268767 - 13408616

139850

ENSAPLT00000019894

13268767 - 13408616

139850