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Intron Name: Anas_platyrhynchos_platyrhynchos_1_133615277_133615502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133615277 - 133615502

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTCACATAACA

Flanking Amino Acid:

QKVDAVFQHKGFFYFFHGSR

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.7

82.1

34.6

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

58.7

0.27

1.8

74.06

36.4

Associated Gene:

Gene:

MMP27

Ensembl Gene ID:

ENSAPLG00000005931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006134

133615176 - 133621984

6809